Version

1.3 [2024-07-17T19:06:00]

Input

A csv-like ASCII file, following the principles defined here: nrt data format

Example of a NRT file:

datetime	station:bah:hr-bbe-ala-03-06:bbe_chla_mean [µg/L]	station:bah:hr-secchi-disk:secchi_depth [m]	station:bah:hr-bbe-ala-03-06:bbe_chla_r2 [µg/L]	station:bah:hr_ctd_sbe_19plus:Temp1 [°C]	station:bah:hr-thermometer_e:temp02 [°C]	station:bah:hr-thermometer_m:temp01 [°C]
2024-01-02T00:00:00.000	6.33	0.9	6.18	6.48	7.2	7.2
2024-01-03T00:00:00.000	5.1400003		5.05	5.23	7.8	7.9
2024-01-04T00:00:00.000	6.1099997	1.1	6.02	6.2	7.2	7.4
2024-01-05T00:00:00.000	6.315	1.0	6.33	6.3	6.8	7.1
2024-01-08T00:00:00.000	7.565	1.0	7.65	7.48	5.4	5.4

At least one column head should meet the expected parameter under study.

Output

  1. column: datetime (time omitted since daily values are expected solely)
  2. column: value itself, no alteration, no correction, or whatsoever, same as input
  3. column: reviewed qc-flag, following ARGO flags (Thierry 2022) as a result of the scientific investigation in this tool
  4. column: comment submitted to the value/parameter row

example:

datetime	temperature [°C]	QC-flag, reviewed	comment
2024-01-02	7.2	1	
2024-01-03	7.9	1	
2024-01-04	7.4	2	is doch okay
2024-01-05	7.1	2	is doch okay
2024-01-08	5.4	1	

Flags

Flagging scheme follows Thierry (2022).

Flag Meaning
0 no QC is performed
1 good data
2 probably good
3 probably bad
4 bad data
5 value changed
6 Not used
7 Not used
8 estimated value
9 missing value

References or nice to read

  • Thierry, C., Keeley, R., Takatsuki, Y., Takashi, Y., Loch, S., Claudia, S., Goldsmith, R., Wong, A., McCreadie, R., Thresher, A., & Anh, T. (2022). Argo user’s manual. 10.13155/29825

  • Felden, J., Möller, L., Schindler, U., Huber, R., Schumacher, S., Koppe, R., Diepenbroek, M., & Glöckner, F. O. (2023). PANGAEA - Data Publisher for Earth & Environmental Science. Scientific Data, 10(1), 347. doi.org/10.1038/s41597-023-02269-x

Changelog

1.3 [2024-07-17T19:06:00]

  • table follows selection
  • lasso tool works (again)
  • still no idea why mondayCheck does not work on server

1.1 [2024-07-03T00:07:00]

  • running on server with https
  • testing against sandbox

     

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